Jenna Poelzer

Bioinformatician

About Me

Bioinformatician with a Master’s degree from Dr. David Wishart’s lab at the University of Alberta, where I contributed to tools such as BASys2, MiMeDB 2.0, and WEGAN to make complex omics data more accessible to researchers. My core interest lies in bridging the gap between laboratory science and bioinformatics, with a particular focus on microbiome and microbiology research, alongside a broader enthusiasm for the life sciences. Background in Medical Laboratory Science, including experience at the Provincial Laboratory of Public Health in Molecular Diagnostics and Acute Clinical Microbiology, as well as serving as lab manager for Dr. Ian Lewis’ research group at the University of Calgary, which specializes in metabolomics and host-pathogen interactions in infectious disease.

Education

M.Sc. Biological Sciences

University of Alberta, Edmonton AB

2023 - 2026

Bioinformatics research, supervised by Dr. David Wishart

Thesis: “Bioinformatic Approaches for Genomic and Community-Scale Microbiology.” Co-developed BASys2 and authored a published review of microbiome bioinformatics tools. Major contributor to WEGAN, minor contributor to MiMeDB 2.0. Received the Graduate Student Teaching Award (2024) as TA for MICRB 264 Lab.

B.Sc. Medical Laboratory Science, with Distinction

University of Alberta, Edmonton AB

2011 - 2015

Trained in clinical laboratory science across hematology, microbiology, biochemistry, and transfusion medicine, with a focus on diagnostic accuracy and quality systems. Received the DRiVE Conference Innovation Award (2025) for HIV diagnostic algorithm validation work, supervised by Dr. Carmen Charlton.

Publications

Bioinformatic tools for microbiome analysis - from raw sequences to biological insights

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Frontiers in Microbiology, 2026

Jenna Poelzer, David S. Wishart

BASys2: a next-generation bacterial genome annotation system

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Nucleic Acids Research, 2025

Jenna Poelzer, Scott Han, Sukanta Saha, Eponine Oler, Ray Kruger, Mark Berjanskii, Scott MacKay, David S. Wishart

WEGAN: a web-based community ecology platform

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Frontiers in Ecology and Evolution, 2025

Gina P. Sykes, Louisa Normington, Jenna Poelzer, Shiyang Zhao, Dana Allen, Samuel Stuart, Eponine Oler, Komal Jot, Vasuk Gautam, Xin Zhao, Jianguo Xia, Glen C. Jickling, David S. Wishart

MiMeDB 2.0: the Human Microbial Metabolome Database for 2026

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Nucleic Acids Research, 2026

Ray Kruger, Eponine Oler, Sukanta Saha, Jenna Poelzer, Scott Han, Mark Peter Punsalan, Brittany Green, Fahrin Bushra, Megane Kyes, Fehintola Disu, Julia Wakoli, Robyn Woudstra, Elykah Tejol, Omolola Fakutan, Fei Wang, Brian L. Lee, Tanvir Sajed, Siyang Tian, Claudia Torres-Calzada, Mark Berjanskii, Scott MacKay, Naama Karu, Rima Kaddurah-Daouk, David S. Wishart

Skills

Programming & Analysis: R, Java, JavaScript, HTML, CSS, command-line/Bash, Git, Docker

Bioinformatics: genome annotation pipelines, full stack web-tool development, microbiome/community-scale analysis, diversity & ordination methods, data visualization

Laboratory & Quality Systems: PCR diagnostics, biosafety, SOP development, QC, automated liquid-handling (Hamilton NIMBUS), LIS: Epic, Cerner Millennium & Sunquest